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Chemistry

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9 chemistry skills. Trigger: chemical structure analysis, reaction prediction, molecular modeling. Design: computational chemistry tools and cheminformatics workflows.

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  • Added June 6, 2026
researchreactapi

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Scanned June 6, 2026

npx -y skills add brycewang-stanford/Auto-Empirical-Research-Skills --skill chemistry --agent claude-code

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SKILL.md
---
name: chemistry-skills
description: "9 chemistry skills. Trigger: chemical structure analysis, reaction prediction, molecular modeling. Design: computational chemistry tools and cheminformatics workflows."
---

# Chemistry — 9 Skills

Select the skill matching the user's need, then `read` its SKILL.md.

| Skill | Description |
|-------|-------------|
| [cactus-cheminformatics-guide](./cactus-cheminformatics-guide/SKILL.md) | PNNL cheminformatics LLM agent for molecular analysis |
| [catalysis-hub-api](./catalysis-hub-api/SKILL.md) | Query computational catalysis reaction data via Catalysis Hub GraphQL |
| [chemeagle-guide](./chemeagle-guide/SKILL.md) | Multi-agent system for chemical literature information extraction |
| [chemgraph-agent-guide](./chemgraph-agent-guide/SKILL.md) | Automate molecular simulations with the ChemGraph agentic framework |
| [computational-chemistry-guide](./computational-chemistry-guide/SKILL.md) | DFT, molecular simulation, and reaction prediction tools for chemists |
| [molecular-dynamics-guide](./molecular-dynamics-guide/SKILL.md) | Molecular dynamics simulation setup, execution, and trajectory analysis |
| [pubchem-api-guide](./pubchem-api-guide/SKILL.md) | Search PubChem for chemical compounds, structures, and bioassay data |
| [retrosynthesis-guide](./retrosynthesis-guide/SKILL.md) | Retrosynthetic analysis and computational reaction prediction |
| [spectroscopy-analysis-guide](./spectroscopy-analysis-guide/SKILL.md) | Spectral data analysis for NMR, IR, mass spectrometry, and UV-Vis |

Files in this skill

  • SKILL.md1.5 KB
  • cactus-cheminformatics-guide/SKILL.md2.5 KB
  • catalysis-hub-api/SKILL.md6.8 KB
  • chemeagle-guide/SKILL.md4.2 KB
  • chemgraph-agent-guide/SKILL.md3.5 KB
  • computational-chemistry-guide/SKILL.md8.9 KB
  • molecular-dynamics-guide/SKILL.md7.6 KB
  • pubchem-api-guide/SKILL.md7.2 KB
  • retrosynthesis-guide/SKILL.md7.3 KB
  • spectroscopy-analysis-guide/SKILL.md9.5 KB

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