Skip to content
Back to skills

Run Experiment

ASecurity

Deploy and run ML experiments on local or remote GPU servers. Use when user says ”run experiment”, ”deploy to server”, or ”start training”.

  • 10 stars
  • 0 votes
  • 0 copies
  • 0 views
  • Added September 24, 2026
ai-agentspythonshellbashgitapibackend

Works with

  • api

Security analysis

A100/100

Pro scans all 2 files and shows the line behind each finding

Scanned September 29, 2026

npx -y skills add FOURTEEN1416/academic-agent-toolkit --skill run-experiment --agent claude-code

Installs into .claude/skills of the current project.

Are you the author of Run Experiment?

Add the live security badge to your README. It updates with every re-scan.

Security grade badge for Run Experiment
[![Security: A — Skills Directory](https://www.skillsdirectory.com/api/skills/fourteen1416-run-experiment/badge)](https://www.skillsdirectory.com/skills/fourteen1416-run-experiment)

More formats (shields.io, HTML) on the badges page. Keep it an A: scan every change in CI with Pro.

Download with Pro
SKILL.md
---
name: run-experiment
description: "Deploy and run ML experiments on local or remote GPU servers. Use when user says ”run experiment”, ”deploy to server”, or ”start training”."
argument-hint: [experiment-description]
allowed-tools: Bash(*), Read, Grep, Glob, Edit, Write, Agent
---

# Run Experiment

Deploy and run ML experiment: $ARGUMENTS

## Workflow

### Step 1: Detect Environment

Read the project's `AGENTS.md` to determine the experiment environment:

- **Local GPU**: Look for local CUDA/MPS setup info
- **Remote server**: Look for SSH alias, conda env, code directory

If no server info is found in `AGENTS.md`, check environment variables (e.g., `$GPU_SERVER`). If still unavailable, log "No server configuration found — running locally if GPU is available, otherwise report the issue" and attempt local execution.

### Step 2: Pre-flight Check

Check GPU availability on the target machine:

**Remote:**
```bash
ssh <server> nvidia-smi --query-gpu=index,memory.used,memory.total --format=csv,noheader
```

**Local:**
```bash
nvidia-smi --query-gpu=index,memory.used,memory.total --format=csv,noheader
# or for Mac MPS:
python -c "import torch; print('MPS available:', torch.backends.mps.is_available())"
```

Free GPU = memory.used < 500 MiB.

### Step 3: Sync Code (Remote Only)

Check the project's `AGENTS.md` for a `code_sync` setting. If not specified, default to `rsync`.

#### Option A: rsync (default)

Only sync necessary files — NOT data, checkpoints, or large files:
```bash
rsync -avz --include='*.py' --exclude='*' <local_src>/ <server>:<remote_dst>/
```

#### Option B: git (when `code_sync: git` is set in AGENTS.md)

Push local changes to remote repo, then pull on the server:
```bash
# 1. Push from local
git add -A && git commit -m "sync: experiment deployment" && git push

# 2. Pull on server
ssh <server> "cd <remote_dst> && git pull"
```

Benefits: version-tracked, multi-server sync with one push, no rsync include/exclude rules needed.

### Step 3.5: W&B Integration (when `wandb: true` in AGENTS.md)

**Skip this step entirely if `wandb` is not set or is `false` in AGENTS.md.**

Before deploying, ensure the experiment scripts have W&B logging:

1. **Check if wandb is already in the script** — look for `import wandb` or `wandb.init`. If present, skip to Step 4.

2. **If not present, add W&B logging** to the training script:
   ```python
   import wandb
   wandb.init(project=WANDB_PROJECT, name=EXP_NAME, config={...hyperparams...})

   # Inside training loop:
   wandb.log({"train/loss": loss, "train/lr": lr, "step": step})

   # After eval:
   wandb.log({"eval/loss": eval_loss, "eval/ppl": ppl, "eval/accuracy": acc})

   # At end:
   wandb.finish()
   ```

3. **Metrics to log** (add whichever apply to the experiment):
   - `train/loss` — training loss per step
   - `train/lr` — learning rate
   - `eval/loss`, `eval/ppl`, `eval/accuracy` — eval metrics per epoch
   - `gpu/memory_used` — GPU memory (via `torch.cuda.max_memory_allocated()`)
   - `speed/samples_per_sec` — throughput
   - Any custom metrics the experiment already computes

4. **Verify wandb login on the target machine:**
   ```bash
   ssh <server> "wandb status"  # should show logged in
   # If not logged in:
   ssh <server> "wandb login <WANDB_API_KEY>"
   ```

> The W&B project name and API key come from `AGENTS.md` (see example below). The experiment name is auto-generated from the script name + timestamp.

### Step 4: Deploy

#### Remote (via SSH + screen)

For each experiment, create a dedicated screen session with GPU binding:
```bash
ssh <server> "screen -dmS <exp_name> bash -c '\
  eval \"\$(<conda_path>/conda shell.bash hook)\" && \
  conda activate <env> && \
  CUDA_VISIBLE_DEVICES=<gpu_id> python <script> <args> 2>&1 | tee <log_file>'"
```

#### Local

```bash
# Linux with CUDA
CUDA_VISIBLE_DEVICES=<gpu_id> python <script> <args> 2>&1 | tee <log_file>

# Mac with MPS (PyTorch uses MPS automatically)
python <script> <args> 2>&1 | tee <log_file>
```

For local long-running jobs, use `run_in_background: true` to keep the conversation responsive.

### Step 5: Verify Launch

**Remote:**
```bash
ssh <server> "screen -ls"
```

**Local:**
Check process is running and GPU is allocated.

### Step 6: Feishu Notification (if configured)

After deployment is verified, 检查 `~/.acat/feishu.json`:
- Send `experiment_done` notification: which experiments launched, which GPUs, estimated time
- If config absent or mode `"off"`: skip entirely (no-op)

## Key Rules

- ALWAYS check GPU availability first — never blindly assign GPUs
- Each experiment gets its own screen session + GPU (remote) or background process (local)
- Use `tee` to save logs for later inspection
- Run deployment commands with `run_in_background: true` to keep conversation responsive
- Report back: which GPU, which screen/process, what command, estimated time
- If multiple experiments, launch them in parallel on different GPUs

## AGENTS.md Example

Users should add their server info to their project's `AGENTS.md`:

```markdown
## Remote Server
- SSH: `ssh my-gpu-server`
- GPU: 4x A100 (80GB each)
- Conda: `eval "$(/opt/conda/bin/conda shell.bash hook)" && conda activate research`
- Code dir: `/home/user/experiments/`
- code_sync: rsync          # default. Or set to "git" for git push/pull workflow
- wandb: false              # set to "true" to auto-add W&B logging to experiment scripts
- wandb_project: my-project # W&B project name (required if wandb: true)
- wandb_entity: my-team     # W&B team/user (optional, uses default if omitted)

## Local Environment
- Mac MPS / Linux CUDA
- Conda env: `ml` (Python 3.10 + PyTorch)
```

> **W&B setup**: Run `wandb login` on your server once (or set `WANDB_API_KEY` env var). The skill reads project/entity from AGENTS.md and adds `wandb.init()` + `wandb.log()` to your training scripts automatically. Dashboard: `https://wandb.ai/<entity>/<project>`.

Files in this skill

  • SKILL.md5.8 KB
  • references/UPSTREAM.md525 B

Attribution

Is this your skill, or is something wrong with this listing? Request removal or report an issue. Author removals are honored within 72 hours.

Comments

Loading comments…