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Claude Skills by aipoch
github.com/aipoch605 skills11 installs808 views
- Grant Gantt Chart GenUse grant gantt chart gen for evidence insight workflows that need structured execution, explicit assumptions, and clear output boundaries.Votes: 0GitHub stars: 1,793
- Gwas DatabaseQuery NHGRI-EBI GWAS Catalog for SNP-trait associations. Search variants by rs ID, disease/trait, gene, retrieve p-values and summary statistics, for genetic epidemiology and polygenic risk scores.Votes: 0GitHub stars: 1,793
- Hgnc ApiAccess the HGNC (HUGO Gene Nomenclature Committee) database to search for and retrieve gene information including symbols, names, IDs, and other metadata.Votes: 0GitHub stars: 1,793
- Hmdb DatabaseAccess the Human Metabolome Database (HMDB) to search metabolites by name/structure/ID and extract chemical/biological/clinical fields when you need metabolomics research data or automated HMDB XML mining.Votes: 0GitHub stars: 1,793
- Ib SummarizerSummarize core safety information from Investigator's Brochures for clinical.Votes: 0GitHub stars: 1,793
- Jaspar ApiAccess JASPAR database for transcription factor binding profiles (matrices), collections, and species via REST API. Use when user wants to search for transcription factors, retrieve matrix details (PFM/PWM), infer profiles from protein sequences, or explore JASPAR collections.Votes: 0GitHub stars: 1,793
- Journal Impact Factor TrendShow journal impact factor and quartile trends over 5 years.Votes: 0GitHub stars: 1,793
- Journal Latest IssueRetrieve the latest journal issue's table of contents and abstracts from URL/DOI/PMID/RSS/TOC sources, then generate Chinese key points locally (no external translation APIs) when a new issue needs quick review and archiving.Votes: 0GitHub stars: 1,793
- Journal MatchmakerAnalyzes academic paper abstracts to recommend optimal journals for submission, considering impact factors, scope alignment, and domain expertise.Votes: 0GitHub stars: 1,793
- Journal SkillsRecommends target journals for manuscript submission by analyzing the paper topic/abstract and the journal distribution of similar PubMed literature; use when users ask for journal recommendation/matching, submission strategy, PubMed search, or similar-literature statistics.Votes: 0GitHub stars: 1,793
- Kegg ApiAccess the KEGG database API to retrieve biological data (genes, pathways, compounds, drugs). Invoke when the user asks to search, list, or get details from KEGG.Votes: 0GitHub stars: 1,793
- Kegg DatabaseDirect access to KEGG via the REST API for academic-only pathway/gene/compound/drug queries; use when you need precise HTTP-level control or targeted KEGG ID mapping.Votes: 0GitHub stars: 1,793
- Key TakeawaysExtracts and summarizes key takeaways from documents, meeting notes, articles, and other text content. Use when the user asks for summaries, bullet points, main points, highlights, or a TL;DR of any document or body of text. Produces structured outputs such as numbered lists, executive summaries, and action items. Supports configurable output formats including JSON export for downstream use.Votes: 0GitHub stars: 1,793
- Keyword Velocity TrackerCalculate literature growth velocity and acceleration to assess research.Votes: 0GitHub stars: 1,793
- Literature Close ReadProduce a structured close-reading report from a paper's full PDF-to-Markdown text (with `## Page XX` pagination and image references) when you need to systematically extract background, research questions, methods, results, limitations, and reproducible experimental details.Votes: 0GitHub stars: 1,793
- Literature Experiment ExtractExtract experimental models, experimental methods, and biomarker information from paper Markdown (typically produced by PDF-to-Markdown tools) when a user provides paper Markdown and needs a structured, evidence-backed summary (1 Markdown + 3 CSVs).Votes: 0GitHub stars: 1,793
- Literature Extensive ReadRapidly skim and summarize academic papers (default:PDF-to-Markdown full text with `## Page XX` pagination and image references) and output a structured extensive-reading summary in Markdown when you need to quickly understand research questions, methods, key results, conclusions, and decide whether intensive reading is worthwhile.Votes: 0GitHub stars: 1,793
- Literature FilteringFilter literature by publication year, journal, and predefined screening rules to produce inclusion/exclusion lists; use when conducting preliminary screening or systematic review screening to narrow the literature scope.Votes: 0GitHub stars: 1,793
- MedchemMedicinal chemistry screening filters for compound prioritization; use when you need to apply drug-likeness rules, PAINS/structural alerts, and complexity metrics to triage or optimize libraries.Votes: 0GitHub stars: 1,793
- Medical Vector SearchVector database retrieval and evidence-based answering for medical research topics. Use when users need knowledge-base-backed answers about methodology, disease mechanisms, drug effects, clinical research, or research tools. Input is a medical research question; output is a st...Votes: 0GitHub stars: 1,793
- Methodology ExtractorExtract experimental methods from one or more papers into a structured protocol-oriented summary; use when comparing methods across studies or drafting reproducible procedures.Votes: 0GitHub stars: 1,793
- Open Access ScoutUse when finding open access journals, checking journal policies, or identifying predatory publishers. Helps researchers locate legitimate open access venues and avoid publication scams.Votes: 0GitHub stars: 1,793
- Open Source License CheckCheck if referenced bioinformatics software/code licenses allow commercial use (GPL vs MIT, etc.).Votes: 0GitHub stars: 1,793
- Open Targets DbQuery the Open Targets Platform to retrieve targets, diseases, or evidence records when you need target-disease association data and evidence-based scores for therapeutic discovery.Votes: 0GitHub stars: 1,793
- Openalex DbAccess the OpenAlex database (240M+ scholarly works) for bibliometric analysis, literature search, and citation tracking; use when you need to query works/authors/institutions/concepts without an API key.Votes: 0GitHub stars: 1,793
- Paper LookupSearch 10 academic paper databases via REST APIs for research papers, preprints, and scholarly articles. Covers PubMed, PMC (full text), bioRxiv, medRxiv, arXiv, OpenAlex, Crossref, Semantic Scholar, CORE, Unpaywall. Use when searching for papers, citations, DOI/PMID lookups, abstracts, full text, open access, preprints, citation graphs, author search, or any scholarly literature query. Triggers on mentions of any supported database or requests like "find papers on X" or "look up this DOI".Votes: 0GitHub stars: 1,793
- Patent Claim MapperUse when mapping patent claims to products, analyzing patent infringement, or preparing freedom-to-operate analyses. Compares patent claims against product features for biotech and pharmaceutical IP assessment.Votes: 0GitHub stars: 1,793
- Patent LandscapeUse when analyzing biotech patent landscapes, identifying white spaces in pharmaceutical IP, tracking competitor patents, or assessing freedom to operate for drug development. Provides comprehensive patent analysis and strategic insights for life sciences innovation.Votes: 0GitHub stars: 1,793
- Pathway Introduction ExpertGenerates comprehensive academic introductions for biological pathways, including signaling processes, markers, and inhibitors. Use when the user asks to introduce a pathway, molecule, or gene.Votes: 0GitHub stars: 1,793
- Pdb DatabaseAccess the RCSB Protein Data Bank (PDB) to search, download, and programmatically retrieve 3D macromolecular structures and metadata; use when you need structure discovery (text/sequence/3D similarity) or automated structural data ingestion for structural biology and drug discovery workflows.Votes: 0GitHub stars: 1,793
- Pdf Extract Experimental MaterialsExtract experimental materials and instrument information from PDFs (or PDF-derived text/Markdown) into three CSV tables; use when a paper/report contains sections like Materials and Methods, Key Resources Table, Reagents, Antibodies, Consumables, Software, Equipment, Instruments, or Reagent Preparation.Votes: 0GitHub stars: 1,793
- Phenotype IntroductionExpert system for generating comprehensive biomedical phenotype introductions with structured academic content. Use when users request detailed explanations of cellular phenotypes including concept, mechanism, regulation, and detection methods in Chinese academic writing.Votes: 0GitHub stars: 1,793
- Pmc Official DownloadDownload PubMed/PMC literature using officially permitted PMC methods. Whenever the user wants to download PMC full text, batch-retrieve PMC Open Access Subset articles, save full text corresponding to PMID/PMCID locally, or needs to determine whether a PubMed article can be l...Votes: 0GitHub stars: 1,793
- Pubchem Database SkillProgrammatic access to the PubChem database (via PUG-REST API and PubChemPy) for searching chemical compounds, retrieving physicochemical properties, performing structure similarity/substructure searches, and obtaining bioactivity data.Votes: 0GitHub stars: 1,793
- Pubmed DatabaseDirect REST API access to PubMed. Advanced Boolean/MeSH queries, E-utilities API, batch processing, citation management. For Python workflows, prefer biopython (Bio.Entrez). Use this for direct HTTP/REST work or custom API implementations.Votes: 0GitHub stars: 1,793
- Pubmed Search SpecialistBuild complex Boolean query strings for precise PubMed/MEDLINE literature retrieval. Trigger when user needs MeSH term mapping, Boolean query construction, advanced PubMed filters, citation searching, systematic review search strategy, or clinical query optimization.Votes: 0GitHub stars: 1,793
- Pubmed Topic RecommendGenerate ~5 actionable research topic recommendations by querying PubMed E-utilities; use when a user provides a research direction/constraints and needs evidence-backed topic ideas quickly.Votes: 0GitHub stars: 1,793
- PytdcTherapeutics Data Commons (PyTDC) for AI-ready therapeutic ML datasets and benchmarks; use it when you need standardized dataset loading, meaningful splits (e.g., scaffold/cold-start), and consistent evaluation for ADME/Toxicity/DTI/DDI or molecular optimization.Votes: 0GitHub stars: 1,793
- Rare Disease Hpo MapperMap patient symptoms to Human Phenotype Ontology terms for gene diagnosis.Votes: 0GitHub stars: 1,793
- Rct Bias Assessment Rob2Automates Risk of Bias 2 (ROB2) assessment for RCT papers by analyzing text against specific domains and synthesizing a report. Use when you need to assess the quality of a clinical trial paper or evaluate risk of bias.Votes: 0GitHub stars: 1,793
- Reactome SkillQuery the Reactome REST API for pathway content and enrichment analyses; use when you need curated pathway data, reaction details, or overrepresentation results for a gene list.Votes: 0GitHub stars: 1,793
- Reagent Substitute ScoutFind validated alternative reagents based on literature citation data.Votes: 0GitHub stars: 1,793
- Reference FinderAutomatically finds and ranks PubMed references for each sentence in scientific text; use when you need titles, DOIs, and brief recommendation reasons from the PubMed E-utilities API.Votes: 0GitHub stars: 1,793
- Reference Retrieval SkillBased on user input, directly find relevant literature or automatically construct PubMed Boolean search queries to retrieve and filter references suitable for citation. Applicable for quickly finding high-quality evidence on specific topics and completing reference lists.Votes: 0GitHub stars: 1,793
- Reference SearchMulti-database literature search and search-strategy design that outputs structured, reproducible result lists; use when you need reference retrieval, systematic searching, review topic selection, or to construct a traceable search strategy.Votes: 0GitHub stars: 1,793
- Research Article WeeklyGenerates a weekly academic literature report based on keywords using PubMed. Use when the user wants to track recent research progress on a specific topic, automatically retrieving, classifying, and summarizing relevant papers from the last 7 days.Votes: 0GitHub stars: 1,793
- Research Hotspot AnalysisAnalyze research hotspots for a disease or topic and recommend representative literature. Use when users need to identify trending directions, topic clusters, or generate hotspot review reports. Input is a disease name or research topic; output is a structured hotspot analysis report and representative literature list.Votes: 0GitHub stars: 1,793
- Research Paper DownloaderDownload academic papers from open-access sources when the user provides a DOI/arXiv ID or requests a keyword-based paper search, and return the saved PDF path.Votes: 0GitHub stars: 1,793
- Retraction WatcherAutomatically scan reference lists and check whether cited papers have been retracted, corrected, or flagged; use before submission, review, or evidence synthesis to reduce citation risk.Votes: 0GitHub stars: 1,793
- Scholar EvaluationImplements the ScholarEval framework to evaluate scholarly documents; trigger when the user provides a PDF/DOCX/TXT file or pasted text and requests critique, scoring, or quality assessment.Votes: 0GitHub stars: 1,793