All authors
Claude Skills by HolobiomicsLab
github.com/HolobiomicsLab7,765 skills0 installs8,278 views
- Statistical Threshold Application MetabolomicsUse when when you have completed a weighted meta-analysis of metabolomicVotes: 0GitHub stars: 15
- Statistical Threshold ParameterizationUse when when you have computed fold-change and p-value statistics fromVotes: 0GitHub stars: 15
- Statistical Visualization Multi GroupUse when when you have loaded search results from two or more DIA-MSVotes: 0GitHub stars: 15
- Status Value ParsingUse when when a project README or documentation embeds badge endpointsVotes: 0GitHub stars: 15
- Steady State Solution Uniform SamplingUse when when you have a constraint-based metabolic model with cell-specificVotes: 0GitHub stars: 15
- Sterol Isomer ClassificationUse when you have LC-IM-MS/MS raw data from sterol-containing tissueVotes: 0GitHub stars: 15
- Sterol Lipid Isomer CharacterizationUse when you have LC-IM-MS/MS experimental data (raw mzML or vendor format)Votes: 0GitHub stars: 15
- Sterol Structure Representation And CurationUse when when you have a collection of N-Me derivatized unsaturated sterolVotes: 0GitHub stars: 15
- Stochastic Weight Averaging EnsembleUse when training a heavily regularized deep neural network on molecularVotes: 0GitHub stars: 15
- Stochastic Weight Averaging ImplementationUse when training a deeply regularized deep neural network on a largeVotes: 0GitHub stars: 15
- Stocsy Metabolite AssignmentUse when use STOCSY when you have preprocessed 1H NMR spectral data withVotes: 0GitHub stars: 15
- Storage Origin Metadata AssignmentUse when when implementing or initializing an MsBackend subclass to handleVotes: 0GitHub stars: 15
- Strain Correlation Hypergeometric AdjustmentUse when you have genomic clusters (GCFs) and metabolomic features (MFs)Votes: 0GitHub stars: 15
- Strain Correlation Score ComputationUse when when you have paired genomics and metabolomics data from multipleVotes: 0GitHub stars: 15
- Strain Correlation Score StandardisationUse when you have computed raw strain correlation scores (based on sharedVotes: 0GitHub stars: 15
- Strain Identifier Mapping Across Genomics MetabolomicsUse when when preparing multiomics datasets for NPLinker that combineVotes: 0GitHub stars: 15
- Strain Spectrum Mapping LinkageUse when when you have downloaded and extracted a GNPS archive (fromVotes: 0GitHub stars: 15
- Streamlit Session State IntegrationUse when when building a Streamlit web application that must coordinateVotes: 0GitHub stars: 15
- String Concatenation With DelimitersUse when when you need to aggregate values from multiple records in aVotes: 0GitHub stars: 15
- String Value Concatenation With DelimitersUse when converting intermediate JSON to a target format (e.g., mwTab)Votes: 0GitHub stars: 15
- String Value Construction From Tabular DataUse when you have a JSON table (e.g., protocol records with 'type', 'id',Votes: 0GitHub stars: 15
- Structural Annotation IntegrationUse when you have structural candidates from in silico tools (SIRIUS/CANOPUS)Votes: 0GitHub stars: 15
- Structural Cluster Annotation MetabolomicsUse when after identifying statistically significant LC-MS features (e.g.,Votes: 0GitHub stars: 15
- Structural Cluster Network ConstructionUse when after you have identified statistically significant LC-MS featuresVotes: 0GitHub stars: 15
- Structural Clustering Validation In Chemical SpaceUse when you have trained or loaded a deep learning model that producesVotes: 0GitHub stars: 15
- Structural Distance Metric Computation'Use when you have two or more lipid structures (in standardized lipidVotes: 0GitHub stars: 15
- Structural Identifier Completeness CheckingUse when preprocessing open mass spectrometry libraries (OMSLs) or aggregatedVotes: 0GitHub stars: 15
- Structural Level Pathway Topology ModelingUse when when you need to compare metabolic network architecture betweenVotes: 0GitHub stars: 15
- Structural Representation Format DetectionUse when when you have a mixed-format input query that may contain aVotes: 0GitHub stars: 15
- Structural Scaffold Feature IdentificationUse when you have 2D NMR spectral data (HSQC, HMBC, COSY) from multipleVotes: 0GitHub stars: 15
- Structural Similarity Calculation Fingerprint BasedUse when you have a set of compounds (e.g., novel NPS analogues in anVotes: 0GitHub stars: 15
- Structural Similarity Ground Truth ValidationUse when you have a spectral library with structural ground truth (InChIKeyVotes: 0GitHub stars: 15
- Structural Similarity Scoring MetabolitesUse when when you have paired MS/MS spectra from unknown metabolitesVotes: 0GitHub stars: 15
- Structural Similarity ScoringUse when when you have a collection of mass spectra with annotated chemicalVotes: 0GitHub stars: 15
- Structural Type CategorizationUse when when you have a set of query chemical compounds (by name orVotes: 0GitHub stars: 15
- Structure Annotation Via Similarity RankingUse when you have an unknown tandem MS spectrum and seek to assign aVotes: 0GitHub stars: 15
- Structure Database Candidate RetrievalUse when you have a mass spectrum of an unknown metabolite with a knownVotes: 0GitHub stars: 15
- Structure File Format ConversionUse when you have raw structure input from diverse external databasesVotes: 0GitHub stars: 15
- Structure Matching Via Smarts PatternsUse when when you need to identify compounds matching specific structuralVotes: 0GitHub stars: 15
- Structure Organism Consistency CheckingUse when after curating structure-organism pairs from multiple sourceVotes: 0GitHub stars: 15
- Structure Organism Pair BinningUse when when you have loaded a structure-organism pairs table from aVotes: 0GitHub stars: 15
- Structure Organism Pair Counting And DeduplicationUse when when you have downloaded a curated structure-organism datasetVotes: 0GitHub stars: 15
- Structure Organism Pair DeduplicationUse when you have a curated natural products dataset (e.g., LOTUS platinumVotes: 0GitHub stars: 15
- Structure Prediction From Mass SpectraUse when you have GNPS-style MGF spectral files from MS/MS experimentsVotes: 0GitHub stars: 15
- Structure Prediction From SpectraUse when you have experimental mass spectrometry spectra (LC–QTOF orVotes: 0GitHub stars: 15
- Structure Ranking From Spectral DataUse when you have an experimental tandem mass spectrum (collision-inducedVotes: 0GitHub stars: 15
- Structure Selection FilteringUse when when you have an unknown metabolite's predicted structural similarityVotes: 0GitHub stars: 15
- Structure Similarity ComparisonUse when after executing a molecular structure prediction model on spectroscopicVotes: 0GitHub stars: 15
- Structure Similarity EvaluationUse when after an NMR-based structure prediction model has generatedVotes: 0GitHub stars: 15
- Structure Similarity Search Across RepositoriesUse when you have a SMILES string or chemical structure and need to determineVotes: 0GitHub stars: 15