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Claude Skills by InternScience
github.com/InternScience485 skills3 installs298 views
- Drugsda Drug LikenessCompute the drug-likeness metrics (QED score and Number of violations of Lipinski's Rule of Five) of the input candidate molecules (SMILES format).Votes: 0GitHub stars: 170
- Drugsda EsmfoldUse ESMFold model to predict 3D structure of the input protein sequence.Votes: 0GitHub stars: 170
- Drugsda File TransferImplement data transmission between the local computer and the MCP Server using Base64 encodingVotes: 0GitHub stars: 170
- Drugsda Linker SamplingGenerate new molecules sampling from the input two warhead fragments.Votes: 0GitHub stars: 170
- Drugsda Mol PropertiesCalculate different types of molecular properties based on SMILES strings, covering basic physicochemical properties, hydrophobicity, hydrogen bonding capability, molecular complexity, topological structures, charge distribution, and custom complexity metrics, respectively.Votes: 0GitHub stars: 170
- Drugsda Mol SimilarityCompute the Tanimoto similarities between a target molecule and a list of candidate molecules using Morgan fingerprints.Votes: 0GitHub stars: 170
- Drugsda Mol2mol SamplingGenerate new molecules sampling from the input molecule.Votes: 0GitHub stars: 170
- Drugsda P2rank```python import json from mcp.client.streamable_http import streamablehttp_client from mcp import ClientSessionVotes: 0GitHub stars: 170
- Drugsda Peptide SamplingGenerate new peptide molecules sampling from the input peptide sequence.Votes: 0GitHub stars: 170
- Drugsda ProsstGiven a protein sequence and its structure, employ ProSST model to predict mutation effects and obtain the top-k mutated sequences.Votes: 0GitHub stars: 170
- Drugsda Rgroup SamplingGenerate new molecules sampling from the input scaffold.Votes: 0GitHub stars: 170
- Drugsda Target RetrieveSearch the protein information from the input gene name and downloads the optimal PDB or AlphaFold structures.Votes: 0GitHub stars: 170
- Enzyme Inhibitor DesignEnzyme Inhibitor Design - Design enzyme inhibitor: target structure, pocket prediction, compound screening, and ADMET assessment. Use this skill for enzyme pharmacology tasks involving retrieve protein data by pdbcode pred pocket prank quick molecule docking pred molecule admet calculate mol drug chemistry. Combines 5 tools from 2 SCP server(s).Votes: 0GitHub stars: 170
- Epigenetics DrugEpigenetics & Drug Response - Link epigenetics to drug response: gene regulation, variant effects, drug interactions, and expression. Use this skill for epigenetic pharmacology tasks involving get overlap region get vep hgvs get drug interactions by drug name get gene expression across cancers. Combines 4 tools from 3 SCP server(s).Votes: 0GitHub stars: 170
- Fda Drug Risk AssessmentAssess drug risks and adverse effects using FDA drug database to retrieve safety information and risk profiles.Votes: 0GitHub stars: 170
- Gene To Drug PipelineGene-to-Drug Discovery Pipeline - Full gene-to-drug pipeline: gene lookup, protein structure, binding pocket, virtual screening, and drug-likeness. Use this skill for translational medicine tasks involving get gene metadata by gene name pred protein structure esmfold run fpocket boltz binding affinity calculate mol drug chemistry. Combines 5 tools from 3 SCP server(s).Votes: 0GitHub stars: 170
- Gene Variant Drug NexusGene-Variant-Drug Nexus - Connect gene variants to drugs: variant effect, gene-disease link, drug associations, and clinical evidence. Use this skill for translational genomics tasks involving get vep hgvs get associated targets by disease efoId get associated drugs by target name clinvar search. Combines 4 tools from 3 SCP server(s).Votes: 0GitHub stars: 170
- Infectious Disease AnalysisInfectious Disease Analysis - Analyze infectious disease: virus data, taxonomy, antimicrobial drugs, and resistance literature. Use this skill for infectious disease tasks involving get virus dataset report get taxonomy get mechanism of action by drug name pubmed search. Combines 4 tools from 3 SCP server(s).Votes: 0GitHub stars: 170
- Lead Compound OptimizationLead Compound Optimization - Optimize a lead compound: validate SMILES, compute drug-likeness, predict ADMET properties, and check ChEMBL bioactivity. Use this skill for medicinal chemistry tasks involving is valid smiles calculate mol drug chemistry pred molecule admet search activity. Combines 4 tools from 3 SCP server(s).Votes: 0GitHub stars: 170
- Molecular Docking PipelineMolecular Docking Pipeline - Complete docking workflow: retrieve protein structure, predict binding pockets, prepare receptor, and dock ligand. Use this skill for structural biology tasks involving retrieve protein data by pdbcode run fpocket convert pdb to pdbqt dock quick molecule docking. Combines 4 tools from 2 SCP server(s).Votes: 0GitHub stars: 170
- One Health AnalysisOne Health Pathogen Analysis - One Health analysis: pathogen genome, cross-species gene comparison, antimicrobial drugs, and environmental context. Use this skill for one health tasks involving get genome dataset report by taxon get homology symbol get mechanism of action by drug name tavily search get taxonomy. Combines 5 tools from 4 SCP server(s).Votes: 0GitHub stars: 170
- Opentargets Disease TargetRetrieve disease-associated targets from Open Targets using disease EFO IDs to identify therapeutic targets.Votes: 0GitHub stars: 170
- Orphan Drug AnalysisOrphan Drug & Rare Disease Analysis - Analyze orphan drugs: Monarch disease phenotypes, OpenTargets targets, FDA drug data, and clinical studies. Use this skill for orphan drug development tasks involving get joint associated diseases by HPO ID list get associated targets by disease efoId get clinical studies info by drug name pubmed search. Combines 4 tools from 4 SCP server(s).Votes: 0GitHub stars: 170
- Pandemic PreparednessPandemic Preparedness Analysis - Pandemic analysis: virus genome, taxonomy, drug candidates, and literature intelligence. Use this skill for public health tasks involving get virus dataset report get virus by taxon genome get mechanism of action by drug name tavily search search literature. Combines 5 tools from 4 SCP server(s).Votes: 0GitHub stars: 170
- Pediatric Drug SafetyPediatric Drug Safety Review - Evaluate pediatric drug safety: pediatric use info, child safety, dosage forms, and overdosage info from FDA. Use this skill for pediatric pharmacology tasks involving get pediatric use info by drug name get child safety info by drug name get dosage forms and strengths by drug name get overdosage info by drug name. Combines 4 tools from 1 SCP server(s).Votes: 0GitHub stars: 170
- Personalized MedicinePersonalized Medicine Report - Generate personalized medicine report: pharmacogenomics, variant effects, drug safety, and clinical pharmacology. Use this skill for precision medicine tasks involving get pharmacogenomics info by drug name get vep hgvs get adverse reactions by drug name get clinical pharmacology by drug name. Combines 4 tools from 2 SCP server(s).Votes: 0GitHub stars: 170
- Pharmacogenomics AnalysisPharmacogenomics Analysis - Pharmacogenomics analysis: FDA pharmacogenomics info, variant effects, ClinVar pathogenicity, and gene expression. Use this skill for pharmacogenomics tasks involving get pharmacogenomics info by drug name get vep hgvs clinvar search get gene expression across cancers. Combines 4 tools from 4 SCP server(s).Votes: 0GitHub stars: 170
- Pharmacokinetics ProfilePharmacokinetics Profile Builder - Build a PK profile: FDA pharmacokinetics, clinical pharmacology, dosage info, and molecular properties. Use this skill for pharmacology tasks involving get pharmacokinetics by drug name get clinical pharmacology by drug name get dosage and storage information by drug name get compound by name. Combines 4 tools from 2 SCP server(s).Votes: 0GitHub stars: 170
- Polypharmacology AnalysisPolypharmacology Analysis - Analyze a drug's multi-target pharmacology: get targets from ChEMBL, functional enrichment from STRING, and pathway links from KEGG. Use this skill for pharmacology tasks involving get target by name get functional enrichment kegg link get mechanism by id. Combines 4 tools from 3 SCP server(s).Votes: 0GitHub stars: 170
- Precision OncologyPrecision Oncology Workflow - Precision oncology: tumor expression profiling, variant analysis, targeted therapy lookup, and clinical trials. Use this skill for precision oncology tasks involving get gene expression across cancers get vep hgvs get associated drugs by target name get clinical studies info by drug name pubmed search. Combines 5 tools from 5 SCP server(s).Votes: 0GitHub stars: 170
- Protein Drug InteractionProtein-Drug Interaction Profiling - Profile protein-drug interactions: protein properties, drug structure, binding affinity prediction, and interaction data. Use this skill for molecular pharmacology tasks involving calculate protein sequence properties ChemicalStructureAnalyzer boltz binding affinity PredictDrugTargetInteraction. Combines 4 tools from 4 SCP server(s).Votes: 0GitHub stars: 170
- Smiles Comprehensive AnalysisSMILES Comprehensive Analysis - Comprehensive SMILES analysis: validate, convert name, compute all molecular descriptors, and predict ADMET. Use this skill for cheminformatics tasks involving is valid smiles ChemicalStructureAnalyzer calculate mol basic info pred molecule admet. Combines 4 tools from 3 SCP server(s).Votes: 0GitHub stars: 170
- Structural PharmacogenomicsStructural Pharmacogenomics - Link structure to pharmacogenomics: variant effect, protein structure change, drug binding, and clinical data. Use this skill for pharmacogenomics tasks involving get vep hgvs pred protein structure esmfold boltz binding affinity get pharmacogenomics info by drug name. Combines 4 tools from 3 SCP server(s).Votes: 0GitHub stars: 170
- Substance ToxicologySubstance Toxicology Report - Toxicology report: PubChem substance data, FDA toxicology, carcinogenicity data, and environmental warnings. Use this skill for toxicology tasks involving get substance by name get nonclinical toxicology info by drug name get carcinogenic mutagenic fertility impairment info by drug name get environmental warning by drug name. Combines 4 tools from 2 SCP server(s).Votes: 0GitHub stars: 170
- Systems PharmacologySystems Pharmacology Analysis - Systems pharmacology: drug targets, protein interactions, pathway enrichment, and gene expression. Use this skill for systems pharmacology tasks involving get target by name get string network interaction get functional enrichment get gene expression across cancers. Combines 4 tools from 3 SCP server(s).Votes: 0GitHub stars: 170
- Toxicity AssessmentDrug Toxicity Assessment - Comprehensive toxicity assessment: FDA adverse reactions, nonclinical toxicology, carcinogenicity data, and ADMET prediction. Use this skill for toxicology tasks involving get adverse reactions by drug name get nonclinical toxicology info by drug name get carcinogenic mutagenic fertility impairment info by drug name pred molecule admet. Combines 4 tools from 2 SCP server(s).Votes: 0GitHub stars: 170
- Virtual ScreeningVirtual Screening Pipeline - Virtual screening: search PubChem by substructure, compute similarity, filter by drug-likeness, and predict binding affinity. Use this skill for drug discovery tasks involving search pubchem by smiles calculate smiles similarity calculate mol drug chemistry boltz binding affinity. Combines 4 tools from 3 SCP server(s).Votes: 0GitHub stars: 170
- Buoyancy Acceleration CalculationCalculate buoyancy forces and acceleration for fluid mechanics and hydrodynamics analysis.Votes: 0GitHub stars: 170
- Capacitance CalculationCalculate electrical capacitance from geometric parameters and dielectric properties for circuit design.Votes: 0GitHub stars: 170
- Electrical Circuit AnalysisElectrical Circuit Analysis - Analyze electrical circuit: compute capacitance, convert resistance units, calculate total charge, and duty cycle. Use this skill for electrical engineering tasks involving convert resistance kOhm to Ohm calculate geometric term calculate absolute error. Combines 3 tools from 3 SCP server(s).Votes: 0GitHub stars: 170
- Electromagnetic AnalysisElectromagnetic Field Analysis - Analyze EM fields: vacuum permittivity, total charge, radiation pressure, and photon calculations. Use this skill for electromagnetics tasks involving calculate vacuum permittivity calculate total charge calculate radiation pressure calculate total power. Combines 4 tools from 2 SCP server(s).Votes: 0GitHub stars: 170
- Energy ConversionEnergy Unit Conversion Pipeline - Convert between energy units and analyze: MeV to Joules, scientific notation, and error calculation. Use this skill for physics tasks involving convert energy MeV to J convert to scientific notation format scientific notation calculate absolute error. Combines 4 tools from 2 SCP server(s).Votes: 0GitHub stars: 170
- Experimental Data ProcessingExperimental Data Processing - Process experimental data: absolute error, mean square, max value, scientific notation formatting. Use this skill for experimental physics tasks involving calculate absolute error calculate mean square calculate max value format scientific notation convert to scientific notation. Combines 5 tools from 1 SCP server(s).Votes: 0GitHub stars: 170
- Geometric Volume CalculationCalculate volumes of geometric shapes for engineering design and mathematical analysis.Votes: 0GitHub stars: 170
- Geometry TrigonometryGeometry & Trigonometry Suite - Solve geometry problems: calculate area, height from sine, angle in degrees, and increase factor. Use this skill for mathematics tasks involving calculate area calculate height from length and sine calculate phi deg calculate increase factor. Combines 4 tools from 1 SCP server(s).Votes: 0GitHub stars: 170
- Length MeasurementLength & Dimension Measurement - Precision length measurement: convert mm to m, calculate length plus width, area, and error. Use this skill for metrology tasks involving convert length mm to m calculate length plus width calculate area calculate absolute error. Combines 4 tools from 3 SCP server(s).Votes: 0GitHub stars: 170
- Measurement Error AnalysisAnalyze measurement errors, uncertainties, and statistical variations in experimental data for quality control.Votes: 0GitHub stars: 170
- Mobility AnalysisCharge Carrier Mobility Analysis - Analyze carrier mobility: calculate new mobility, compute vacuum permittivity, and error analysis. Use this skill for semiconductor physics tasks involving calculate new mobility calculate vacuum permittivity calculate absolute error calculate mean square. Combines 4 tools from 2 SCP server(s).Votes: 0GitHub stars: 170
- Nuclear PhysicsNuclear Physics Calculations - Nuclear physics: energy conversion MeV to J, calculate total power, photon rate, and error analysis. Use this skill for nuclear physics tasks involving convert energy MeV to J calculate total power calculate incident photon rate calculate absolute error. Combines 4 tools from 3 SCP server(s).Votes: 0GitHub stars: 170
- Optical Frequency CalculationCalculate optical frequency and wavelength relationships for photonics and electromagnetic analysis.Votes: 0GitHub stars: 170