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Claude Skills by stanfish06
github.com/stanfish061,787 skills13 installs1,944 views
- Zarr PythonChunked N-D arrays for cloud storage (Zarr-Python 3). Compressed arrays, parallel I/O, S3/GCS via fsspec, NumPy/Dask/Xarray compatible, for large-scale scientific computing pipelines.Votes: 0GitHub stars: 8
- ZoologistExpert-thinking profile for Zoologist (field / museum / lab / integrative animal biology): Reasons from Bauplan, homoplasy, and voucher-backed ICZN taxonomy through COL/WoRMS/GBIF IPT, VertNet/Arctos curation, Folmer COI/BOLD BIN, geomorph GPA, IQ- TREE phylogenetics, and Distance/MARK occupancy–abundance models while treating trap selectivity, checklist drift, barcode-only species, and morphometric...Votes: 0GitHub stars: 8
- Zoom Meeting Sdk WebZoom Meeting SDK for Web - Embed Zoom meeting capabilities into web applications. Two integration options: Client View (full-page, familiar Zoom UI) and Component View (embeddable, Promise-based API). Includes SharedArrayBuffer setup for HD video, gallery view, and virtual backgrounds.Votes: 0GitHub stars: 8
- ZoteroUse Zotero Desktop from Codex to enable/probe the local API, search a local Zotero library, list items/collections/tags, export BibTeX, insert citation keys into LaTeX or Markdown drafts, read indexed full text when requested, and import BibTeX/RIS records into Zotero through the connector server. Use when the user mentions Zotero, citations, references.bib, BibTeX export, local Zotero API, localhost:23119, or adding citations from a Zotero library.Votes: 0GitHub stars: 8
- Analytics Engineering> [!info] What it does > Authoritative reference for the neo4j-agent-memory Python package — a graph-native memory system for AI agents built on Neo4j — and for the hosted service (NAMS) at memory.neo4jlabs.com. Use this skill whenever the user mentions neo4j-agent-memory, agent memory with Neo4j, context graphs, the POLE+O model, MemoryClient/MemorySettings, the memory MCP server, or any of the framework integrations (LangChain, PydanticAI, CrewAI, AWS Strands, Google ADK, Microsoft Agent Fr...Votes: 0GitHub stars: 8
- Analytics Engineering> [!info] What it does > Manages Neo4j Aura Agents via the v2beta1 REST API — create, list, get, update, delete, and invoke Aura agents backed by an AuraDB instance. Use when configuring Aura Agent tools (CypherTemplate, SimilaritySearch, Text2Cypher), setting system prompts, deploying agents to REST or MCP endpoints, or invoking agents with natural language queries. Covers OAuth2 auth, organization/project scoping, tool parameter schemas, and InvokeAgentResponse format. Does NOT cover AuraDB...Votes: 0GitHub stars: 8
- Analytics Engineering> [!info] What it does > Serverless Aura Graph Analytics (AGA) GDS Sessions — covers GdsSessions, AuraGraphDataScience, AuraAPICredentials, DbmsConnectionInfo, SessionMemory, get_or_create, remote graph projection with gds.v2.graph.project and gds.graph.project.remote, gds.v2 session endpoints, gds.v2.graph.construct, AuraDB Cypher API memory/sessionId projection, algorithms, write-back, and session lifecycle. Use for AuraDB-connected, self-managed Neo4j, or standalone DataFrame/Spark session...Votes: 0GitHub stars: 8
- Analytics Engineering> [!info] What it does > Provisions and manages Neo4j Aura instances via CLI (aura-cli v1.7+) or REST API. Use when creating, pausing, resuming, resizing, or deleting AuraDB Free/Professional/Business Critical/VDC instances; downloading credentials; scripting CI/CD pipelines; polling async status; or using the Terraform neo4j/neo4j-aura provider. Covers auth setup (client credentials OAuth2), credential lifecycle (download once — never recoverable), instance type selection, region codes, and ...Votes: 0GitHub stars: 8
- Analytics Engineering> [!info] What it does > Use when working with Neo4j command-line tools — neo4j-cli (modern unified CLI — Cypher via Bolt, schema inspection, Aura management, Docker containers, credential management, agent skill catalog install; install with curl -sSfL https://neo4j.sh/install.sh | bash), neo4j-admin (backup, restore, import, memory sizing), cypher-shell (ad-hoc queries, scripting, CI/CD), or neo4j-mcp (quick MCP server install). Does NOT cover Cypher query authoring — use neo4j-cypher-skill...Votes: 0GitHub stars: 8
- Analytics Engineering> [!info] What it does > Generates, optimizes, and validates Cypher 25 queries for Neo4j 2025.x and 2026.x. Use when writing new Cypher queries, optimizing slow queries, graph pattern matching, vector or fulltext search, subqueries, or batch writes. Covers MATCH, MERGE, CREATE, WITH, RETURN, CALL, UNWIND, FOREACH, LOAD CSV, SEARCH, expressions, functions, indexes, and subqueries. Does NOT handle driver migration or API changes — use neo4j-migration-skill. Does NOT cover DB administration or s...Votes: 0GitHub stars: 8
- Analytics Engineering> [!info] What it does > Ingests unstructured and semi-structured documents into Neo4j as a knowledge graph. Use when chunking PDFs, HTML, plain text, or Markdown; extracting entities and relationships from text with an LLM (SimpleKGPipeline, neo4j-graphrag); loading JSON via apoc.load.json; building Document→Chunk→Entity graph structures; or connecting LangChain/LlamaIndex document loaders to Neo4j. Covers neo4j-graphrag SimpleKGPipeline, LLM Graph Builder web UI, entity resolution, chunking...Votes: 0GitHub stars: 8
- Analytics Engineering> [!info] What it does > Neo4j .NET Driver v6 — IDriver lifecycle, DI registration (singleton), ExecutableQuery fluent API, ExecuteReadAsync/ExecuteWriteAsync managed transactions, IResultCursor (FetchAsync/ ToListAsync), record value access (.Get<T>/As<T>), null safety, UNWIND batching, temporal types, await using, EagerResult, object mapping, CancellationToken, error handling, and common traps. Use when writing C# or .NET code connecting to Neo4j. Also triggers on Neo4j.Driver, IDriver, Exe...Votes: 0GitHub stars: 8
- Analytics Engineering> [!info] What it does > Covers the Neo4j Go Driver v6 — driver lifecycle, ExecuteQuery, managed and explicit transactions, session config, error handling, data type mapping, and connection tuning. Use when writing Go code that connects to Neo4j, setting up NewDriver or ExecuteQuery, debugging sessions/transactions/result handling, or working with neo4j-go-driver v5→v6 migration. Triggers on NewDriver, ExecuteQuery, SessionConfig, ManagedTransaction, neo4j-go-driver. Does NOT handle Cypher qu...Votes: 0GitHub stars: 8
- Analytics Engineering> [!info] What it does > Neo4j Java Driver v6 — driver lifecycle, Maven/Gradle setup, executableQuery, executeRead/Write managed transactions, explicit transactions, async/reactive patterns, error handling, data type mapping, connection pool tuning, causal consistency/bookmarks. Use when writing Java or Kotlin code that connects to Neo4j via GraphDatabase.driver, executableQuery, SessionConfig, executeRead, executeWrite, or TransactionCallback. Does NOT handle Cypher authoring — use neo4j-cyp...Votes: 0GitHub stars: 8
- Analytics Engineering> [!info] What it does > Neo4j JavaScript/TypeScript Driver v6 — driver lifecycle, executeQuery, managed transactions (executeRead/executeWrite), session.run, Integer handling, JSON serialization, record access, async/await patterns, TypeScript types, error handling, and connection setup for Node.js and browser. Use when writing JS/TS code that connects to Neo4j — neo4j.driver(), executeQuery, executeRead, executeWrite, session.run, neo4j.int, record.get, Integer, BookmarkManager, bolt://, ne...Votes: 0GitHub stars: 8
- Analytics Engineering> [!info] What it does > Neo4j Python Driver v6 — driver lifecycle, execute_query, managed and explicit transactions, async (AsyncGraphDatabase), result handling, data type mapping, error handling, UNWIND batching, connection pool tuning, and causal consistency. Use when writing Python code that connects to Neo4j via GraphDatabase.driver, execute_query, execute_read, execute_write, AsyncGraphDatabase, neo4j.Result, or RoutingControl. Package name is `neo4j` (not neo4j-driver) since v6. Python...Votes: 0GitHub stars: 8
- Analytics Engineering> [!info] What it does > Neo4j Graph Data Science (GDS) embedded plugin via Python client or Cypher — covers GraphDataScience, gds.v2 plugin endpoints, gds.version, native projection, Cypher projection, graph catalog operations, stream/stats/mutate/write modes, memory estimation, PageRank, Louvain, WCC, FastRP, KNN, Node Similarity, ML pipelines, and cleanup. Use for Aura Pro, self-managed, local, or offline Neo4j DBMS with the GDS plugin installed. Does NOT cover Aura Graph Analytics GDS Ses...Votes: 0GitHub stars: 8
- Analytics Engineering> [!info] What it does > Use Neo4j GenAI Plugin ai.text.* functions and procedures for in-Cypher embedding generation, text completion, structured output, chat, tokenization, and batch ingestion. Covers ai.text.embed(), ai.text.embedBatch(), ai.text.completion(), ai.text.structuredCompletion(), ai.text.aggregateCompletion(), ai.text.chat(), ai.text.tokenCount(), ai.text.chunkByTokenLimit(), and provider configuration for OpenAI, Azure OpenAI, VertexAI, and Amazon Bedrock. Requires CYPHER 25. ...Votes: 0GitHub stars: 8
- Analytics Engineering> [!info] What it does > Orchestrates zero-to-running-app in 8 stages — prerequisites → context → provision → model → load → explore → query → build. Each stage reads its own reference file. Supports HITL and fully autonomous operation. Use when starting a new Neo4j project from scratch, provisioning Aura, generating synthetic data, building a notebook or app, or running the full onboarding pipeline. Time budget ≤15 min autonomous, ≤90 min HITL. Does NOT cover Cypher query authoring — use neo...Votes: 0GitHub stars: 8
- Analytics Engineering> [!info] What it does > Build and configure a GraphQL API backed by Neo4j using @neo4j/graphql v7 (current) or v5 (LTS). Covers Neo4jGraphQL constructor, getSchema(), assertIndexesAndConstraints(), type definitions with @node, @relationship (IN/OUT/UNDIRECTED), @cypher for custom resolvers, @authorization/@authentication for JWT/JWKS security, auto-generated queries/mutations, OGM programmatic access, subscriptions via CDC, and Apollo Federation. Use when writing typeDefs, securing fields, o...Votes: 0GitHub stars: 8
- Analytics Engineering> [!info] What it does > Build GraphRAG retrieval pipelines on Neo4j using the neo4j-graphrag Python package (v1.16.0+). Covers retriever selection (VectorRetriever, HybridRetriever, VectorCypherRetriever, HybridCypherRetriever, Text2CypherRetriever, ToolsRetriever), external vector DB retrievers (Weaviate, Pinecone, Qdrant), retrieval_query Cypher fragments, query_params, filters, GraphRAG pipeline wiring (GraphRAG + LLM + prompt), all LLM providers (OpenAI, Anthropic, VertexAI, Bedrock, Coh...Votes: 0GitHub stars: 8
- Analytics Engineering> [!info] What it does > Import structured data into Neo4j — LOAD CSV, CALL IN TRANSACTIONS, neo4j-admin database import full (offline bulk), apoc.load.csv/json, apoc.periodic.iterate, driver batch writes. Covers method selection, header file format, type coercion, null handling, ON ERROR modes, CONCURRENT TRANSACTIONS, pre-import constraint setup, and post-import validation. Use when importing CSV/JSON/Parquet files, migrating relational data to graph, or bulk-loading large datasets. Does NO...Votes: 0GitHub stars: 8
- Analytics Engineering> [!info] What it does > Configure and operate the Neo4j Connector for Kafka (sink + source) and the native Neo4j CDC API. Covers Cypher/Pattern/CUD sink strategies, CDC-based and query-based source, exactly-once semantics, DLQ error handling, Confluent Cloud managed connector, schema registry (Avro/JSON), and native db.cdc.query cursor-loop patterns (Neo4j 5.13+ Enterprise/Aura BC/VDC). Use when streaming Kafka events into Neo4j, streaming Neo4j changes to Kafka, or querying Neo4j change eve...Votes: 0GitHub stars: 8
- Analytics Engineering> [!info] What it does > Use when installing, configuring, or troubleshooting the official Neo4j MCP server (neo4j/mcp) — connecting Claude Code, Claude Desktop, Cursor, Windsurf, VS Code, Kiro, or other MCP-compatible editors to a Neo4j database via stdio or HTTP transport. Covers the four MCP tools (get-schema, read-cypher, write-cypher, list-gds-procedures), read-only mode, and multi-database configuration. Does NOT cover writing Cypher queries via those tools — use neo4j-cypher-skill. Doe...Votes: 0GitHub stars: 8
- Analytics Engineering> [!info] What it does > Migrates Neo4j driver code and Cypher queries from older versions (4.x, 5.x) to current (2025.x/2026.x, Cypher 25). Covers Python, JavaScript/Node.js, Java, .NET, and Go drivers — package renames, removed APIs, version requirements, diff-ready fixes. Also handles Cypher syntax migration — QPE paths, CALL subqueries, id() → elementId(), PERIODIC COMMIT → CALL IN TRANSACTIONS, and all Cypher 25 removals. Does NOT write new Cypher queries — use neo4j-cypher-skill. Does N...Votes: 0GitHub stars: 8
- Analytics Engineering> [!info] What it does > Design, review, and refactor Neo4j graph data models. Use when choosing node labels vs relationship types vs properties, migrating relational/document schemas to graph, detecting anti-patterns (generic labels, supernodes, missing constraints), designing intermediate nodes for n-ary relationships, enforcing schema with constraints and indexes, or assessing an existing model against graph modeling best practices. Does NOT handle Cypher query authoring — use neo4j-cypher...Votes: 0GitHub stars: 8
- Analytics Engineering> [!info] What it does > Neo4j Visualization Library (NVL) — framework-agnostic graph rendering for the browser. Covers @neo4j-nvl/base (NVL class, nodes/relationships, Canvas vs WebGL renderer), @neo4j-nvl/interaction-handlers (ZoomInteraction, PanInteraction, DragNodeInteraction, ClickInteraction, HoverInteraction, BoxSelectInteraction, LassoInteraction, KeyboardInteraction), and @neo4j-nvl/react (InteractiveNvlWrapper, BasicNvlWrapper, StaticPictureWrapper). Use when rendering a Neo4j grap...Votes: 0GitHub stars: 8
- Analytics Engineering> [!info] What it does > Diagnoses and fixes slow Neo4j Cypher queries by reading execution plans, identifying bad operators (AllNodesScan, CartesianProduct, Eager, NodeByLabelScan), and prescribing fixes (indexes, hints, query rewrites, runtime selection). Use when a query is slow, when EXPLAIN or PROFILE output needs interpretation, when dbHits or pageCacheHitRatio are poor, when cardinality estimation diverges from actuals, or when deciding between slotted/pipelined/parallel runtimes. Cove...Votes: 0GitHub stars: 8
- Analytics Engineering> [!info] What it does > Programmatic security management in Neo4j — RBAC/ABAC, user lifecycle (CREATE/ALTER/DROP USER), role lifecycle (CREATE/GRANT ROLE/DROP ROLE), privilege grants and denies (GRANT/DENY/REVOKE on graph, database, DBMS), property-level access control, sub-graph access control, SHOW PRIVILEGES inspection, and auth provider config reference (LDAP, OIDC/SSO). Use when an agent needs to manage users, roles, or privileges programmatically via Cypher on the system database. Does...Votes: 0GitHub stars: 8
- Analytics Engineering> [!info] What it does > Run Neo4j Graph Analytics algorithms (PageRank, Louvain, WCC, Dijkstra, KNN, Node2Vec, FastRP, GraphSAGE) directly inside Snowflake without moving data. Use when running graph algorithms against Snowflake tables via the Neo4j Snowflake Native App ("GDS Snowflake", "graph algorithms in Snowflake", "Neo4j Graph Analytics"). Covers the explore → prepare projection views → project-compute-write flow, the strict view/column type rules the graph engine requires, exact SQL C...Votes: 0GitHub stars: 8
- Analytics Engineering> [!info] What it does > Use when reading from or writing to Neo4j with Apache Spark or Databricks using the Neo4j Connector for Apache Spark 6.0 (org.neo4j.connectors:spark) or 5.x (org.neo4j:neo4j-connector-apache-spark). Covers SparkSession setup, DataFrame reads via labels/Cypher/relationship scan, DataFrame writes with SaveMode, node.keys for MERGE, relationship write mapping, partition and batch tuning, PySpark and Scala examples, Databricks cluster config, Databricks secrets for creden...Votes: 0GitHub stars: 8
- Analytics Engineering> [!info] What it does > Use when building Spring Boot applications with Neo4j using Spring Data Neo4j (SDN 7.x/8.x) — @Node entity mapping, @Relationship, @RelationshipProperties, Neo4jRepository, ReactiveNeo4jRepository, @Query annotations, application.yml configuration, projections, Neo4jClient, Neo4jTemplate, transactions, auditing, or Spring AI Neo4jVectorStore vector search. Does NOT handle raw Java driver code without Spring — use neo4j-driver-java-skill. Does NOT handle Cypher query a...Votes: 0GitHub stars: 8
- Analytics Engineering> [!info] What it does > Create and manage Neo4j vector indexes, run vector similarity search (ANN/kNN), store embeddings on nodes or relationships, use SEARCH clause (Neo4j 2026.01+, preferred) or db.index.vector.queryNodes() procedure (deprecated 2026.04, still works on 2025.x), configure HNSW and quantization options, pick similarity function and embedding provider dimensions, and batch-update embeddings. Use when tasks involve CREATE VECTOR INDEX, vector.dimensions, cosine/euclidean searc...Votes: 0GitHub stars: 8
- Bio Databases Platforms> [!info] What it does > Submit compact BioStudies and ArrayExpress API requests for free-text search and accession-based study retrieval. Use when a user wants concise BioStudies summaries **Source:** [skills/biostudies-arrayexpress-skill/SKILL.md](../../../skills/biostudies-arrayexpress-skill/SKILL.md) · **Domain:** [Bio Databases, Lab & Cloud Platforms](../../maps/bio-databases-platforms.md) · **Table:** [skills.base](../../skills.base) · **Index:** [Skills Index](../../index.md)Votes: 0GitHub stars: 8
- Bio Databases Platforms> [!info] What it does > Submit compact cBioPortal API requests for studies, molecular profiles, mutations, clinical data, and samples. Use when a user wants concise cBioPortal summaries **Source:** [skills/cbioportal-skill/SKILL.md](../../../skills/cbioportal-skill/SKILL.md) · **Domain:** [Bio Databases, Lab & Cloud Platforms](../../maps/bio-databases-platforms.md) · **Table:** [skills.base](../../skills.base) · **Index:** [Skills Index](../../index.md)Votes: 0GitHub stars: 8
- Bio Databases Platforms> [!info] What it does > Submit compact CELLxGENE Discover API requests for public collection and dataset metadata. Use when a user wants concise single-cell collection summaries **Source:** [skills/cellxgene-skill/SKILL.md](../../../skills/cellxgene-skill/SKILL.md) · **Domain:** [Bio Databases, Lab & Cloud Platforms](../../maps/bio-databases-platforms.md) · **Table:** [skills.base](../../skills.base) · **Index:** [Skills Index](../../index.md)Votes: 0GitHub stars: 8
- Bio Databases Platforms> [!info] What it does > Submit compact ClinicalTrials.gov API v2 requests for study search, metadata, enums, search areas, and field statistics. Use when a user wants concise ClinicalTrials.gov summaries **Source:** [skills/clinicaltrials-skill/SKILL.md](../../../skills/clinicaltrials-skill/SKILL.md) · **Domain:** [Bio Databases, Lab & Cloud Platforms](../../maps/bio-databases-platforms.md) · **Table:** [skills.base](../../skills.base) · **Index:** [Skills Index](../../index.md)Votes: 0GitHub stars: 8
- Bio Databases Platforms> [!info] What it does > Submit compact EFO OLS4 requests for search, term lookup, children, and descendants. Use when a user wants concise EFO resolution or ontology-expansion summaries **Source:** [skills/efo-ontology-skill/SKILL.md](../../../skills/efo-ontology-skill/SKILL.md) · **Domain:** [Bio Databases, Lab & Cloud Platforms](../../maps/bio-databases-platforms.md) · **Table:** [skills.base](../../skills.base) · **Index:** [Skills Index](../../index.md)Votes: 0GitHub stars: 8
- Bio Databases Platforms> [!info] What it does > Submit compact Ensembl REST API requests for lookup, overlap, cross-reference, and variation endpoints. Use when a user wants concise Ensembl summaries **Source:** [skills/ensembl-skill/SKILL.md](../../../skills/ensembl-skill/SKILL.md) · **Domain:** [Bio Databases, Lab & Cloud Platforms](../../maps/bio-databases-platforms.md) · **Table:** [skills.base](../../skills.base) · **Index:** [Skills Index](../../index.md)Votes: 0GitHub stars: 8
- Bio Databases Platforms> [!info] What it does > Submit compact EpiGraphDB API requests for ontology, literature, MR, gene-drug, and support-path evidence. Use when a user wants concise EpiGraphDB summaries **Source:** [skills/epigraphdb-skill/SKILL.md](../../../skills/epigraphdb-skill/SKILL.md) · **Domain:** [Bio Databases, Lab & Cloud Platforms](../../maps/bio-databases-platforms.md) · **Table:** [skills.base](../../skills.base) · **Index:** [Skills Index](../../index.md)Votes: 0GitHub stars: 8
- Bio Databases Platforms> [!info] What it does > Submit compact EVA REST requests for species metadata and archived variant lookups. Use when a user wants concise European Variation Archive summaries **Source:** [skills/eva-skill/SKILL.md](../../../skills/eva-skill/SKILL.md) · **Domain:** [Bio Databases, Lab & Cloud Platforms](../../maps/bio-databases-platforms.md) · **Table:** [skills.base](../../skills.base) · **Index:** [Skills Index](../../index.md)Votes: 0GitHub stars: 8
- Bio Databases Platforms> [!info] What it does > Submit compact Human Protein Atlas requests for gene JSON, search downloads, and page-level tissue or cell-line lookups. Use when a user wants concise Human Protein Atlas summaries; save raw JSON or HTML only on request. **Source:** [skills/human-protein-atlas-skill/SKILL.md](../../../skills/human-protein-atlas-skill/SKILL.md) · **Domain:** [Bio Databases, Lab & Cloud Platforms](../../maps/bio-databases-platforms.md) · **Table:** [skills.base](../../skills.base) ...Votes: 0GitHub stars: 8
- Bio Databases Platforms> [!info] What it does > Submit compact IPD REST requests for HLA allele and cell-level metadata using the public IPD query API. Use when a user wants concise IPD summaries; save raw JSON or text only on request. **Source:** [skills/ipd-skill/SKILL.md](../../../skills/ipd-skill/SKILL.md) · **Domain:** [Bio Databases, Lab & Cloud Platforms](../../maps/bio-databases-platforms.md) · **Table:** [skills.base](../../skills.base) · **Index:** [Skills Index](../../index.md)Votes: 0GitHub stars: 8
- Bio Databases Platforms> [!info] What it does > Submit compact MetaboLights requests for study discovery and study-level metabolomics metadata. Use when a user wants concise MetaboLights summaries **Source:** [skills/metabolights-skill/SKILL.md](../../../skills/metabolights-skill/SKILL.md) · **Domain:** [Bio Databases, Lab & Cloud Platforms](../../maps/bio-databases-platforms.md) · **Table:** [skills.base](../../skills.base) · **Index:** [Skills Index](../../index.md)Votes: 0GitHub stars: 8
- Bio Databases Platforms> [!info] What it does > Submit compact MGnify API requests for microbiome studies, samples, and biome metadata. Use when a user wants concise MGnify summaries **Source:** [skills/mgnify-skill/SKILL.md](../../../skills/mgnify-skill/SKILL.md) · **Domain:** [Bio Databases, Lab & Cloud Platforms](../../maps/bio-databases-platforms.md) · **Table:** [skills.base](../../skills.base) · **Index:** [Skills Index](../../index.md)Votes: 0GitHub stars: 8
- Bio Databases Platforms> [!info] What it does > Submit compact Clinical Tables NCBI Gene requests for human gene lookup, pagination, and field selection. Use when a user wants concise autocomplete-style human gene search results **Source:** [skills/ncbi-clinicaltables-skill/SKILL.md](../../../skills/ncbi-clinicaltables-skill/SKILL.md) · **Domain:** [Bio Databases, Lab & Cloud Platforms](../../maps/bio-databases-platforms.md) · **Table:** [skills.base](../../skills.base) · **Index:** [Skills Index](../../index...Votes: 0GitHub stars: 8
- Bio Databases Platforms> [!info] What it does > Submit compact NCBI Entrez E-Utilities requests for PubMed, Gene, Protein, Nucleotide, PMC metadata, and GEO metadata workflows. Use when a user wants concise Entrez search, fetch, summary, or link results; save raw JSON or XML only on request. **Source:** [skills/ncbi-entrez-skill/SKILL.md](../../../skills/ncbi-entrez-skill/SKILL.md) · **Domain:** [Bio Databases, Lab & Cloud Platforms](../../maps/bio-databases-platforms.md) · **Table:** [skills.base](../../skills...Votes: 0GitHub stars: 8
- Bio Databases Platforms> [!info] What it does > Submit compact Open Targets Platform GraphQL requests for target, disease, drug, variant, study, and search data, including associated-disease datasource heatmap matrices. Use when a user wants concise Open Targets summaries or per-datasource evidence context **Source:** [skills/opentargets-skill/SKILL.md](../../../skills/opentargets-skill/SKILL.md) · **Domain:** [Bio Databases, Lab & Cloud Platforms](../../maps/bio-databases-platforms.md) · **Table:** [skills.bas...Votes: 0GitHub stars: 8
- Bio Databases Platforms> [!info] What it does > Submit compact PRIDE Archive API requests for proteomics project discovery and project-level metadata. Use when a user wants concise PRIDE summaries **Source:** [skills/pride-skill/SKILL.md](../../../skills/pride-skill/SKILL.md) · **Domain:** [Bio Databases, Lab & Cloud Platforms](../../maps/bio-databases-platforms.md) · **Table:** [skills.base](../../skills.base) · **Index:** [Skills Index](../../index.md)Votes: 0GitHub stars: 8
- Bio Databases Platforms> [!info] What it does > Submit compact ProteomeXchange PROXI requests for datasets, libraries, peptidoforms, proteins, PSMs, spectra, and USI examples. Use when a user wants concise PROXI summaries **Source:** [skills/proteomexchange-skill/SKILL.md](../../../skills/proteomexchange-skill/SKILL.md) · **Domain:** [Bio Databases, Lab & Cloud Platforms](../../maps/bio-databases-platforms.md) · **Table:** [skills.base](../../skills.base) · **Index:** [Skills Index](../../index.md)Votes: 0GitHub stars: 8