Data & Analytics

Data analysis, BI, visualization, datasets, statistics, and ML workflows

skills in category: 11,597
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Showing 97–120 of 11,597 skills

Maxquant ProteomicsAMaxQuant + Perseus proteomics pipeline: run MaxQuant for LFQ and SILAC; parse proteinGroups.txt in Python; filter contaminants/decoys; log2 + median-normalize; impute MNAR; t-test with FDR; volcano plot; GO/pathway enrichment. Use Proteome Discoverer for Thermo-native processing; FragPipe/MSFragger for GPU-accelerated DB search.datapythongoVotes: 0GitHub stars: 19
Homer Motif AnalysisADe novo and known TF motif enrichment in ChIP-seq/ATAC-seq peaks via HOMER. findMotifsGenome.pl finds over-represented patterns vs background; annotatePeaks.pl assigns context (TSS distance, gene, repeat). Use after MACS3 to identify enriched TFs, annotate peaks with nearest genes, and validate ChIP-seq via the target motif.datapythongoVotes: 0GitHub stars: 19
Cellchat Cell CommunicationAInfer and visualize intercellular communication from scRNA-seq with CellChat (R). Build CellChat from Seurat/counts → subset CellChatDB ligand-receptor pairs → over-expressed genes per group → communication probabilities → pathway signaling → network centrality (senders/receivers/influencers) → chord/heatmap/bubble plots → cross-condition compare. Human, mouse. Use liana for pure-Python.datapythongoVotes: 0GitHub stars: 19
Arboreto Grn InferenceAGRN inference from expression via GRNBoost2 (gradient boosting) or GENIE3 (Random Forest). Load matrix, filter by TFs, infer TF-target-importance links, save network. Dask-parallelized to single-cell scale. Core SCENIC component.datapythongoVotes: 0GitHub stars: 19
CanteraARuns Cantera homogeneous chemical reactors and evaluates ignition delay with mechanism provenance, conservation checks, and numerical refinement. Use for combustion kinetics, closed adiabatic ideal-gas constant-volume or constant-pressure ignition, temperature histories, or mechanism-specific ignition-delay comparisons.datapythonbashVotes: 0GitHub stars: 22
MlviewAAnalyze an ML or deep-learning workflow with the active host model and publish a source-linked interactive MLView artifact.datajavascriptpythonVotes: 0GitHub stars: 22
New Page Indexation TrackerATracks how long new pages take to get picked up by Google and start earning traffic, from live Google Search Console data in your Coupler.io workspace — days from publish to first impression, to first click, to a settled ranking, and which pages have gone nowhere. Use for "are my new pages getting indexed by Google", "how long until new content ranks in search", "which of my pages is Google ignoring", "did my new posts get picked up in search", "why isn't my new page showing up in Google", "h...datagobackendVotes: 0GitHub stars: 35
Gsc Search Opportunity FinderAFinds the clicks you're leaving on the table in Google Search, from live Search Console data in your Coupler.io workspace — queries ranking just off page one, pages that get seen but not clicked, and pages quietly competing with each other for the same query. Use for "which keywords are close to page one on my site", "striking distance keyword report", "which of my pages get search impressions but no clicks", "find my organic CTR gaps", "are my pages cannibalizing each other in search", "wher...datarustgoVotes: 0GitHub stars: 35
Gsc Ga4 Landing Page PerformanceAJoins Google Search Console and GA4 to show which landing pages bring organic traffic and what that traffic does once it lands, from live data in your Coupler.io workspace — search clicks and rankings next to engagement, key events and revenue, per page. Use for "does my organic search traffic convert", "which landing pages actually make money from SEO", "which SEO pages are worth the effort", "my rankings are up but sales aren't", "which pages get search clicks but no conversions", "landing ...datarustgoVotes: 0GitHub stars: 35
Gsc Country Device PerformanceABreaks organic search performance down by country and device, from live Google Search Console data in your Coupler.io workspace — clicks, impressions, click-through rate and average position by market and by phone/desktop/tablet, against the site's own average. Use for "how does my organic search do by country", "which markets underperform in search", "is mobile or desktop better for my search traffic", "where am I losing search clicks by device", "should I localise for SEO", "which countries...datagobackendVotes: 0GitHub stars: 35
Content Decay DetectorAFinds pages that are quietly losing organic traffic over time, from live Google Search Console data in your Coupler.io workspace — which pages are down on clicks, whether it's a ranking slip or fewer people searching, and which are worth updating first. Use for "which of my pages are losing search traffic", "what content is decaying", "which blog posts should I refresh", "why is my organic search traffic sliding", "which pages dropped in Google since last quarter", "find pages that need updat...datagobackendVotes: 0GitHub stars: 35
Branded Vs Nonbranded Search SplitASplits your organic search into brand and non-brand and tells you which is really growing, from live Google Search Console data in your Coupler.io workspace — clicks, impressions, CTR and position for people searching your name versus people finding you cold, the non-brand share and its trend, and new non-brand queries coming in. Use for "is my SEO growth real or just brand", "brand vs non-brand organic search", "how much of my search traffic is people searching my name", "is my non-brand sea...datagobackendVotes: 0GitHub stars: 35
TableauALoad when the user asks about Tableau: find, build, copy, edit, redesign, or check a Tableau workbook, dashboard, view, or data source. Covers the tableau_* tools, the .twb builder with its design layer, data sources on SignalPilot connections, the design standard, and the render review.datapythongoVotes: 0GitHub stars: 485
D Official Market AnalysisA基于最新可验证的政府、监管、平台官方、行业协会、上市公司财报和权威第三方数据，研究影视、微短剧、漫剧、AI影视、网络动画与剧情短视频市场。用于“调用D”“用D分析”“现在什么剧情最火”“分析微短剧/漫剧/AI影视市场”“这个剧本有没有市场”“适合哪个平台”“是否值得立项”等市场趋势、题材排名、平台对比和具体项目评估任务；默认研究中国大陆最近30天、90天和12个月，并在需要时增加海外对照。datapythonsqlVotes: 0GitHub stars: 214
TelluriumASimulates biochemical kinetic models from SBML or Antimony with Tellurium and libRoadRunner, checks model units, compares deterministic parameter perturbations, and exports and replays SBML plus SED-ML COMBINE archives. Use for reaction-network time courses, kinetic parameters, concentration dynamics and reproducible simulation experiments; steady-state constraint-based metabolic flux analysis belongs to cobrapy.datapythongoVotes: 0GitHub stars: 47,690
Qiime2 AmpliconAProcesses paired-end 16S amplicon reads into QIIME 2 ASVs and taxonomy with retained artifact provenance. Checks paired FASTQ manifests, primer orientation diagnostics, predicted post-trimming overlap, sample IDs, runtime versions and read retention, and guides selection of compatible taxonomic classifiers.datapythonrustVotes: 0GitHub stars: 47,690
PycalphadAComputes finite-temperature CALPHAD equilibria, phase fractions, and phase compositions from thermodynamic TDB databases using pycalphad. Use for alloy phase stability, equilibrium temperature sweeps, tie lines, lever-rule checks, or reproducible phase-fraction calculations with explicit components and mole-fraction conditions.datapythongoVotes: 0GitHub stars: 47,690
PybammASimulates lithium-ion battery charge, discharge and rest experiments with PyBaMM, records parameter-set provenance, checks mesh and solver sensitivity, and compares predicted voltage curves with measured cycling data. Use for SPM or DFN electrochemical battery modeling, C-rate protocols, voltage cutoffs, parameter studies and numerical validation of battery simulations.datapythonbashVotes: 0GitHub stars: 47,690
Nwb ConversionAConverts neuroscience acquisition data to Neurodata Without Borders files with NeuroConv and PyNWB, preserves metadata and timebases, checks evidence-based clock alignment, and produces schema validation, NWB Inspector findings and round-trip checks. Use for NWB conversion and synchronization of planar single-channel two-photon TIFF imaging plus timestamped behavioral position CSV; this skill does not perform spike sorting or claim tested support for arbitrary acquisition formats.datapythonbashVotes: 0GitHub stars: 47,690
NmrglueAProcesses calibrated one-dimensional complex NMR free-induction decays with nmrglue into phased spectra, peak candidates, and signed integration regions. Use for raw 1D NMR processing, ppm-axis verification, apodization, Fourier transformation, manual phasing, baseline correction, or reproducible spectral integration.datapythonbashVotes: 0GitHub stars: 47,690
FlowkitAAnalyzes flow cytometry data with FlowKit, including spillover compensation, logicle and biexponential transforms, hierarchical gating, GatingML strategies, and supported FlowJo 10 workspaces. Use for reproducible gate counts, population percentages, gated fluorescence summaries, or reproducing a FlowJo analysis in Python. For FCS metadata inspection or file-format repair alone, use FlowIO.datapythonbashVotes: 0GitHub stars: 47,690
CanteraARuns Cantera homogeneous chemical reactors and evaluates ignition delay with mechanism provenance, conservation checks, and numerical refinement. Use for combustion kinetics, closed adiabatic ideal-gas constant-volume or constant-pressure ignition, temperature histories, or mechanism-specific ignition-delay comparisons.datapythonbashVotes: 0GitHub stars: 47,690
Microsoft Ads Waste And ScaleBUse for "where am I wasting money on Microsoft Ads", "which Bing keywords should I pause", "find me negative keywords for Bing", "Microsoft Ads search terms report analysis", "which Bing publishers should I exclude", "which Microsoft Ads campaigns should I scale", "clean up my Bing Ads account", "what should I cut on Microsoft Ads and where should the money go" — even without the words "waste" or "scale". Also use when someone wants a budget-neutral reallocation proposal for the Microsoft Ads...datagosqlVotes: 0GitHub stars: 35
Microsoft Ads Shopping And Product PerformanceBUse for "how are my Microsoft Shopping campaigns doing", "which products sell on Bing", "which products should I stop advertising on Microsoft Ads", "why aren't my products showing on Bing", "what's my ROAS by product on Microsoft Ads", "which Bing product searches should I add as negatives", or "are my Bing product groups set up right" — even when the user only says "Bing Shopping" or "product ads". Microsoft Ads (Bing) only, for accounts running Shopping or product ads.datagosqlVotes: 0GitHub stars: 35