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Benchmark Table Mining Starter

ASecurity

Parse small benchmark markdown tables from paper notes and summarize datasets, metrics, and best-performing methods.

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  • Added September 8, 2026
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Scanned September 8, 2026

npx -y skills add ma-compbio-lab/SkillFoundry --skill benchmark-table-mining-starter --agent claude-code

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SKILL.md
---
name: benchmark-table-mining-starter
description: Parse small benchmark markdown tables from paper notes and summarize datasets, metrics, and best-performing methods.
---

# Benchmark Table Mining Starter

Use this starter on locally prepared markdown notes that contain one or more benchmark tables.

The wrapper:

- scans all markdown table blocks in the note
- selects the most leaderboard-like table instead of assuming the first table is the benchmark
- preserves canonical leaderboard fields such as `task`, `dataset`, `metric`, `model`, and `score` when they exist

```bash
python3 skills/scientific-knowledge/benchmark-table-mining-starter/scripts/run_benchmark_table_mining.py \
  --input skills/scientific-knowledge/benchmark-table-mining-starter/examples/benchmark_note.md
```

For a broader Papers-with-Code-style note that includes an earlier non-leaderboard table, use:

```bash
python3 skills/scientific-knowledge/benchmark-table-mining-starter/scripts/run_benchmark_table_mining.py \
  --input skills/scientific-knowledge/benchmark-table-mining-starter/examples/sample_benchmark_notes.md
```

Files in this skill

  • SKILL.md1.1 KB
  • assets/README.md127 B
  • assets/sample_benchmark_rows.json765 B
  • examples/README.md262 B
  • examples/benchmark_note.md250 B
  • examples/sample_benchmark_notes.md613 B
  • metadata.yaml1.3 KB
  • refs.md205 B
  • scripts/run_benchmark_table_mining.py12.1 KB
  • tests/test_run_benchmark_table_mining.py1.8 KB

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