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Interpro Entry Summary

ASecurity

Use this skill to fetch a protein family or domain entry from the official InterPro API and summarize its key metadata.

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  • Added September 8, 2026
ai-agentspythongobashapidatabase

Works with

  • cli
  • api

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Scanned September 8, 2026

npx -y skills add ma-compbio-lab/SkillFoundry --skill interpro-entry-summary --agent claude-code

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SKILL.md
# InterPro Entry Summary

Use this skill to fetch a protein family or domain entry from the official InterPro API and summarize its key metadata.

## What it does

- Calls the official InterPro API for a specific InterPro accession.
- Returns the accession, name, type, GO-term count, and member-database coverage.
- Produces compact JSON suitable for downstream protein-annotation or domain-family workflows.

## When to use it

- You need a lightweight protein family/domain lookup skill.
- You want an official InterPro-backed summary starter for proteomics or protein biology tasks.

## Example

```bash
python3 skills/proteomics/interpro-entry-summary/scripts/fetch_interpro_entry.py \
  --accession IPR000023 \
  --out scratch/interpro/ipr000023_summary.json
```

## Verification

- Skill-local tests: `python3 -m unittest discover -s skills/proteomics/interpro-entry-summary/tests -p 'test_*.py'`
- Repository smoke: `python3 -m unittest tests.smoke.test_phase25_agent_and_clinical_skills -v`

Files in this skill

  • SKILL.md1000 B
  • assets/README.md86 B
  • examples/README.md96 B
  • metadata.yaml1013 B
  • refs.md71 B
  • scripts/fetch_interpro_entry.py2.4 KB
  • tests/test_fetch_interpro_entry.py1.8 KB

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