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Claude Skills by HolobiomicsLab
github.com/HolobiomicsLab7,765 skills0 installs8,278 views
- Variance Stabilization NormalizationUse when after k-nearest neighbor imputation (cutoff ≥0.6 data retention)Votes: 0GitHub stars: 15
- Variational Autoencoder TrainingUse when after preprocessing and normalizing joint ST/SM AnnData objectsVotes: 0GitHub stars: 15
- Vectorized Operation VerificationUse when when implementing or auditing S4 replacement methods (e.Votes: 0GitHub stars: 15
- Vendor Data StandardizationUse when you have raw MS data files directly from a vendor instrumentVotes: 0GitHub stars: 15
- Vendor Export Schema MappingUse when raw MRM lipidomics data arrives in vendor-specific export formatsVotes: 0GitHub stars: 15
- Vendor File Format Specification HandlingUse when you have a raw MSI data file from an unknown or mixed set ofVotes: 0GitHub stars: 15
- Vendor Format AbstractionUse when you have mass-spectrometry raw data files from multiple vendorsVotes: 0GitHub stars: 15
- Vendor Format Recognition And Handling'Use when when Rapid QC-MS receives vendor-format LC-MS acquisition filesVotes: 0GitHub stars: 15
- Vendor Format Routing DispatchUse when you have a collection of raw mass spectrometry data files fromVotes: 0GitHub stars: 15
- Vendor Format To Standard ConversionUse when when ingesting raw LC-MS/MS output from a mass spectrometryVotes: 0GitHub stars: 15
- Vendor Instrument Data HandlingUse when you have acquired raw mass spectrometry data in vendor-proprietaryVotes: 0GitHub stars: 15
- Vendor Mass Spectrometry File Format HandlingUse when you have one or more vendor mass spectrometry raw files (ThermoVotes: 0GitHub stars: 15
- Vendor Proprietary Format InteroperabilityUse when you have mass spectrometry raw data in a proprietary vendorVotes: 0GitHub stars: 15
- Vendor Raw File Format RecognitionUse when you have a directory containing mass spectrometry data filesVotes: 0GitHub stars: 15
- Version Control Feature Branch ManagementUse when when you have modifications to propose for a shared codebaseVotes: 0GitHub stars: 15
- Version Specific Deployment ConfigurationUse when you have edited core R scripts (Modular.r, genEIC.r, MS1Spectragen.r,Votes: 0GitHub stars: 15
- Vimms Controller Configuration And ExecutionUse when you have a set of chemical compounds (with known retention timesVotes: 0GitHub stars: 15
- Virtual Chemical Mixture GenerationUse when you need to create a synthetic chemical population for testingVotes: 0GitHub stars: 15
- Virtual Environment ConfigurationUse when you have a Python application (e.g., ROIAL-NMR) with documentedVotes: 0GitHub stars: 15
- Virtual Environment CreationUse when before installing ENPKG dependencies for the first time, orVotes: 0GitHub stars: 15
- Virtual Mass Spectrometer ConfigurationUse when when you have generated or extracted a chemical mixture (viaVotes: 0GitHub stars: 15
- Virtual Screening RankingUse when you have a library of natural product compounds (encoded asVotes: 0GitHub stars: 15
- Visual Pattern Recognition In Spectral DataUse when after database search algorithms have scored unknown MS samplesVotes: 0GitHub stars: 15
- Visual Studio Project ManagementUse when when you have cloned a multi-framework .NET project (e.g., MsdialWorkbenchVotes: 0GitHub stars: 15
- Visualization Comparative Performance MetricsUse when you have execution-time data for the same set of plotting operationsVotes: 0GitHub stars: 15
- Visualization Format ConversionUse when you have generated exploratory data analysis plots (PCA, correlationVotes: 0GitHub stars: 15
- Vocabulary Coverage ValidationUse when after merging separate vocabularies for distinct data modalitiesVotes: 0GitHub stars: 15
- Volcano Plot Construction From Fold Change And PvalueUse when you have omu_summary output containing log2FoldChange and adjustedVotes: 0GitHub stars: 15
- Volcano Plot Construction From Omics DataUse when after statistical analysis (e.g., edgeR) has produced a resultsVotes: 0GitHub stars: 15
- Volcano Plot GenerationUse when you have CSV files containing fold-change estimates and statisticalVotes: 0GitHub stars: 15
- Volcano Plot Interpretation Cancer BenignUse when when you have performed two-group differential expression analysisVotes: 0GitHub stars: 15
- Volume Mount And Persistence DesignUse when you are composing multiple containerized services that haveVotes: 0GitHub stars: 15
- Warping Function Comparison Across Algorithms'Use when after applying two or more LC-MS alignment algorithms (suchVotes: 0GitHub stars: 15
- Wasserstein Distance ComputationUse when when you have both an observed NMR mixture spectrum and a candidateVotes: 0GitHub stars: 15
- Web Api Service Integration MappingUse when you need to support multiple external services (CIR, CTS, PubChem,Votes: 0GitHub stars: 15
- Web Application Documentation MiningUse when you have access to a project README or repository documentationVotes: 0GitHub stars: 15
- Web Application Endpoint MappingUse when you have a user-submitted spectrum with associated domain contextVotes: 0GitHub stars: 15
- Web Application Server Logic MappingUse when you are wrapping an existing R package or analytical libraryVotes: 0GitHub stars: 15
- Web Service Api IntegrationUse when when you have a parsed mass spectrum (precursor m/z, ionizationVotes: 0GitHub stars: 15
- Web Service Deployment ValidationUse when when you need to confirm that a publicly hosted academic webVotes: 0GitHub stars: 15
- Web Service Health MonitoringUse when your annotation pipeline depends on multiple external web convertersVotes: 0GitHub stars: 15
- Web Service Health VerificationUse when after deploying a containerized web application (e.g., via `dockerVotes: 0GitHub stars: 15
- Webassembly Local Loading SetupUse when you have downloaded a web application (e.g., COLMARvista) thatVotes: 0GitHub stars: 15
- Webworker File Access EnablingUse when you need to run a local HTML file that uses WebWorker or WebAssemblyVotes: 0GitHub stars: 15
- Weighted Correlation Network Module InterpretationUse when after WGCNA has identified and named metabolic correlation modulesVotes: 0GitHub stars: 15
- Weighted Loss Function OptimizationUse when when training a dual-encoder architecture (bi-encoder + cross-encoder)Votes: 0GitHub stars: 15
- Weka Format Pathway ExportUse when you have computed a pathway dysregulation score matrix (PDSmatrix)Votes: 0GitHub stars: 15
- Whitespace Character DetectionUse when validating project JSON documents against the platform's schemaVotes: 0GitHub stars: 15
- Whittaker Smoother Signal DenoisingUse when after baseline correction (e.g., via asymmetric least squares)Votes: 0GitHub stars: 15
- Wikidata IntegrationUse when when building or maintaining a local natural-product referenceVotes: 0GitHub stars: 15