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Claude Skills by HolobiomicsLab
github.com/HolobiomicsLab7,765 skills0 installs8,278 views
- Windows Desktop Application DeploymentUse when when you have cloned a .NET Framework or .NET Core WPF projectVotes: 0GitHub stars: 15
- Wine Environment Initialization ValidationUse when use this skill after building a Docker image that installs WineVotes: 0GitHub stars: 15
- Wine Windows Runtime ConfigurationUse when you have a Windows-only C# GUI application (e.g., AirdPro) builtVotes: 0GitHub stars: 15
- Wine Windows Runtime Initialization DiagnosticsUse when you are deploying a Windows .NET application (e.g., AirdProVotes: 0GitHub stars: 15
- Within Batch Randomization By Metadata AttributeUse when you have already assigned samples to batches (inter-batch balanceVotes: 0GitHub stars: 15
- Within Subject Correlation ModelingUse when your metabolomics dataset is in long format with repeated measurementsVotes: 0GitHub stars: 15
- Wmy Network Prediction Confidence ScoringUse when after initial lipid candidate annotation via spectral libraryVotes: 0GitHub stars: 15
- Word Embedding Aggregation For Spectral DataUse when when you have pre-processed MS/MS spectra and a pre-trainedVotes: 0GitHub stars: 15
- Word Embedding Based Spectrum RepresentationUse when when comparing large numbers of MS/MS spectra against spectralVotes: 0GitHub stars: 15
- Word2vec Embedding Training Mass SpectrometryUse when you have a large collection of preprocessed MS/MS spectra (typicallyVotes: 0GitHub stars: 15
- Word2vec Model Inference Unknown Word HandlingUse when when applying a pre-trained Word2Vec model to mass spectra atVotes: 0GitHub stars: 15
- Word2vec Model TrainingUse when when you have a collection of mass spectra (e.Votes: 0GitHub stars: 15
- Word2vec Vocabulary Matching And Unknown Peak HandlingUse when converting MS/MS spectra into Spec2Vec embeddings using a pre-trainedVotes: 0GitHub stars: 15
- Workflow Architecture DocumentationUse when you need to understand how a complex MS/MS spectral search systemVotes: 0GitHub stars: 15
- Workflow Branching Logic DesignUse when when a spectral matching tool produces mixed output containingVotes: 0GitHub stars: 15
- Workflow Build System Usage'Use when when you have a Nextflow workflow repository with a Makefile,Votes: 0GitHub stars: 15
- Workflow Configuration And ParameterizationUse when when preparing to execute the Nextflow4MS-DIAL workflow on rawVotes: 0GitHub stars: 15
- Workflow Configuration ParsingUse when you have a workflow.csv file co-located with sequence.csv inVotes: 0GitHub stars: 15
- Workflow Context Preservation'Use when when submitting OpenMS workflows to RQ (Redis Queue) in onlineVotes: 0GitHub stars: 15
- Workflow Definition Schema ValidationUse when you have located a workflow definition file (YAML or JSON) inVotes: 0GitHub stars: 15
- Workflow Orchestration And ParallelizationUse when when you have a multi-step computational chemistry or molecularVotes: 0GitHub stars: 15
- Workflow Output Validation And QaUse when after executing a Nextflow-based MS-DIAL workflow on .mzML LC-HRMSVotes: 0GitHub stars: 15
- Workflow Pipeline Execution ValidationUse when you have prepared metabolomics input files (feature quantificationVotes: 0GitHub stars: 15
- Workflow Reproducibility ValidationUse when after implementing or deploying a containerized Nextflow workflowVotes: 0GitHub stars: 15
- Workflow Routing ConfigurationUse when when you have raw mass spectrometry data files from multipleVotes: 0GitHub stars: 15
- Workflow Status MonitoringUse when you need to verify that a GitHub Actions workflow (such as 'dev_build_release.Votes: 0GitHub stars: 15
- Wpf Gui CompilationUse when when you have cloned the MsdialWorkbench repository and needVotes: 0GitHub stars: 15
- Xcms Data Import PreprocessingUse when you have raw LC-MS or GC-MS data files from a mass spectrometerVotes: 0GitHub stars: 15
- Xcms Feature Extraction And GroupingUse when you have raw mzXML LC/MS files from replicated metabolomicsVotes: 0GitHub stars: 15
- Xcms Grouped Object ManipulationUse when you have preprocessed LC-MS data with detected chromatographicVotes: 0GitHub stars: 15
- Xcms Grouping Result InterpretationUse when xCMS grouping has been performed on LC-MS data from studiesVotes: 0GitHub stars: 15
- Xcms Object Handling And PreprocessingUse when you have raw gas or liquid chromatography–mass spectrometryVotes: 0GitHub stars: 15
- Xcms Output Replacement WorkflowUse when xCMS has produced aligned LC-MS features but alignment qualityVotes: 0GitHub stars: 15
- Xcms Parameter EstimationUse when you have raw untargeted metabolomics data (at least 3 samplesVotes: 0GitHub stars: 15
- Xcms Parameter Optimization MswUse when when you have direct-injection or low-complexity mass spectrometryVotes: 0GitHub stars: 15
- Xcms Profile ParsingUse when you have xcms-processed LC-MS data with detected feature groupsVotes: 0GitHub stars: 15
- Xcms Ramclustr Data Object IntegrationUse when when you have raw LC-MS all-ion fragmentation (AIF) chromatogramsVotes: 0GitHub stars: 15
- Xcms Ramclustr Object IntegrationUse when you have centroid-mode LC–MS all-ion fragmentation (AIF) dataVotes: 0GitHub stars: 15
- Xcms Workflow ExecutionUse when you have raw LC-MS data files (mzML, netCDF, or raw vendor formats)Votes: 0GitHub stars: 15
- Xenobiotic Metabolite Annotation From Ms MsUse when you have aligned MS/MS feature tables (e.g., from MSDial ver.Votes: 0GitHub stars: 15
- Xic Marker AnnotationUse when when you have a resolved spectrum file (mzML, mzXML) and needVotes: 0GitHub stars: 15
- Xml Element Parsing And Object SerializationUse when you have spectrum or chromatogram data stored as XML stringsVotes: 0GitHub stars: 15
- Xml Parsing And Element Tree SerializationUse when when spectrum or chromatogram data is stored as serialized XMLVotes: 0GitHub stars: 15
- Xml Schema Configuration For Bioinformatics ToolsUse when you have a working R package or bioinformatics pipeline (e.g.,Votes: 0GitHub stars: 15
- Xml Spectrum Element DeserializationUse when when you have retrieved a decompressed XML data block from anVotes: 0GitHub stars: 15
- Xml Structured Metadata ConstructionUse when when you have synthesized or assembled mass spectrometry spectralVotes: 0GitHub stars: 15
- Y Ion Signal Detection And Noise AssessmentUse when you have extracted a centroided MS/MS spectrum from a ThermoVotes: 0GitHub stars: 15
- Yaml Configuration HandlingUse when when initializing a MolNotator project with user-defined parametersVotes: 0GitHub stars: 15
- Yaml Json Structural ParsingUse when you have a versioned workflow definition file (YAML or JSON)Votes: 0GitHub stars: 15
- Z Score Normalization For Cross Dataset ComparisonUse when you have multiple scoring functions (e.g., strain correlationVotes: 0GitHub stars: 15