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Claude Skills by ma-compbio-lab
github.com/ma-compbio-lab267 skills0 installs392 views
- Perturb Seq StarterUse this starter when a task lands in the `Perturb-seq` frontier leaf and the repository has curated resources but no dedicated runtime implementation yet.Votes: 0GitHub stars: 38
- Pseudobulk Analysis StarterUse this starter when a task lands in the `Pseudobulk analysis` frontier leaf and the repository has curated resources but no dedicated runtime implementation yet.Votes: 0GitHub stars: 38
- Pydeseq2 Differential Expression StarterUse this skill to run a deterministic toy bulk RNA-seq differential-expression pass with PyDESeq2 and summarize the ranked genes.Votes: 0GitHub stars: 38
- Rna Velocity StarterUse this starter when a task lands in the `RNA velocity` frontier leaf and the repository has curated resources but no dedicated runtime implementation yet.Votes: 0GitHub stars: 38
- Scanpy Cell Type Annotation StarterUse this skill to score marker-gene programs with Scanpy and assign simple cell-type labels on a deterministic toy single-cell matrix.Votes: 0GitHub stars: 38
- Scanpy Combat Batch Correction StarterUse this skill to run a deterministic toy batch-correction pass with Scanpy's ComBat implementation and summarize how much the batch gap shrinks after correction.Votes: 0GitHub stars: 38
- Scanpy Dpt Trajectory StarterUse this skill to compute a deterministic toy diffusion-pseudotime trajectory with Scanpy `tl.dpt`.Votes: 0GitHub stars: 38
- Scanpy Qc StarterUse this skill to run a lightweight Scanpy QC pass on a toy count matrix with the repository-managed Scanpy environment.Votes: 0GitHub stars: 38
- Scanpy Ranked Genes StarterUse this skill to run a deterministic toy differential-expression pass with Scanpy and extract top marker genes per group from a small count matrix.Votes: 0GitHub stars: 38
- Spatial Transcriptomics StarterUse this starter when a task lands in the `Spatial transcriptomics` frontier leaf and the repository has curated resources but no dedicated runtime implementation yet.Votes: 0GitHub stars: 38
- Dash Scientific Dashboard StarterUse this skill to build a deterministic Dash dashboard scaffold from toy measurements and inspect the resulting layout, callback, and preview artifacts.Votes: 0GitHub stars: 38
- Figure Recreation From Papers StarterUse this starter when a task lands in the `Figure recreation from papers` frontier leaf and the repository has curated resources but no dedicated runtime implementation yet.Votes: 0GitHub stars: 38
- Matplotlib Publication Plot StarterUse this skill to turn a small tabular dataset into a deterministic publication-style figure and compact fit summary.Votes: 0GitHub stars: 38
- Mkdocs Summary Catalog StarterUse this skill to build a tiny catalog website with MkDocs from a JSON page specification.Votes: 0GitHub stars: 38
- Plotly Interactive Report StarterUse this skill to turn a small deterministic TSV into an interactive HTML report with Plotly.Votes: 0GitHub stars: 38
- Quarto Notebook Report StarterUse this skill to render a small deterministic Jupyter notebook into an HTML report with Quarto.Votes: 0GitHub stars: 38
- Skill Browser Mindmap Generation StarterUse this starter when a task lands in the `Skill browser / mindmap generation` frontier leaf and the repository has curated resources but no dedicated runtime implementation yet.Votes: 0GitHub stars: 38